STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000026693Amino acid transporter. (157 aa)    
Predicted Functional Partners:
LOC106943501
Amino acid transporter.
  
  
  0.707
slc7a7
Solute carrier family 7 member 7.
  
  
 0.558
LOC106963019
Amino acid transporter.
  
  
 
0.543
slc1a1
Amino acid transporter.
  
  
 
0.542
LOC106951471
Amino acid transporter.
  
 
 
0.540
slc1a2
Amino acid transporter.
  
 
 
0.538
LOC106962429
Amino acid transporter.
  
 
 
0.538
LOC106959294
Solute carrier family 13 member 5b.
    
 0.537
slc13a3
Solute carrier family 13 member 3.
    
 0.537
LOC106935130
Solute carrier family 13 member 2.
    
 0.537
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.