STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106960375Rho/rac guanine nucleotide exchange factor (GEF) 18a. (977 aa)    
Predicted Functional Partners:
RND3
Rho family GTPase 3a.
   
 0.712
LOC106942744
Rho-related GTP-binding protein RhoE.
   
 0.712
LOC106964421
Ras homolog family member Ca.
   
 0.712
LOC106959654
Uncharacterized protein.
   
 0.712
LOC106965113
Uncharacterized protein.
   
 0.712
LOC106960333
Uncharacterized protein.
   
 0.712
LOC106960220
Uncharacterized protein.
   
 0.712
RND1
Rho family GTPase 1.
   
 0.712
LOC106950869
Rho family GTPase 1b.
   
 0.712
LOC106962714
Uncharacterized protein.
   
 0.712
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.