STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atf7Cyclic AMP-dependent transcription factor ATF-7; Plays important functions in early cell signaling. Binds the cAMP response element (CRE) (consensus: 5'-GTGACGT[AG][AG]-3'), a sequence present in many viral and cellular promoters. (505 aa)    
Predicted Functional Partners:
jun
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
0.876
LOC106956726
JunE proto-oncogene, AP-1 transcription factor subunit.
   
0.876
crebbp
CREB binding protein a.
   
 0.809
LOC106942609
CREB binding protein b.
   
 0.809
LOC106954976
Mitogen-activated protein kinase.
    
 0.808
ENSPLAP00000013662
E1A binding protein p300 b.
   
 0.808
LOC106938759
V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.
    
 0.790
LOC106964606
Activating transcription factor 4b.
    
 0.778
LOC106957415
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.768
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.768
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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