Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPLAP00000007554 | PC | ENSPLAP00000007554 | ENSPLAP00000020191 | Lipoyl-binding domain-containing protein. | Pyruvate carboxylase. | 0.930 |
ENSPLAP00000007554 | sgsm3 | ENSPLAP00000007554 | ENSPLAP00000028156 | Lipoyl-binding domain-containing protein. | Small G protein signaling modulator 3. | 0.477 |
LOC106947207 | sgsm3 | ENSPLAP00000023724 | ENSPLAP00000028156 | C2H2-type domain-containing protein. | Small G protein signaling modulator 3. | 0.542 |
PC | ENSPLAP00000007554 | ENSPLAP00000020191 | ENSPLAP00000007554 | Pyruvate carboxylase. | Lipoyl-binding domain-containing protein. | 0.930 |
PC | sgsm3 | ENSPLAP00000020191 | ENSPLAP00000028156 | Pyruvate carboxylase. | Small G protein signaling modulator 3. | 0.477 |
TBC1D13 | sgsm3 | ENSPLAP00000015911 | ENSPLAP00000028156 | TBC1 domain family member 13. | Small G protein signaling modulator 3. | 0.426 |
cog4 | sgsm3 | ENSPLAP00000013064 | ENSPLAP00000028156 | Component of oligomeric golgi complex 4. | Small G protein signaling modulator 3. | 0.529 |
nubpl | otud3 | ENSPLAP00000018630 | ENSPLAP00000005028 | Nucleotide binding protein-like. | OTU deubiquitinase 3. | 0.478 |
nubpl | sgsm3 | ENSPLAP00000018630 | ENSPLAP00000028156 | Nucleotide binding protein-like. | Small G protein signaling modulator 3. | 0.532 |
nubpl | ufsp2 | ENSPLAP00000018630 | ENSPLAP00000010791 | Nucleotide binding protein-like. | Ufm1-specific peptidase 2. | 0.412 |
otud3 | nubpl | ENSPLAP00000005028 | ENSPLAP00000018630 | OTU deubiquitinase 3. | Nucleotide binding protein-like. | 0.478 |
otud3 | sgsm3 | ENSPLAP00000005028 | ENSPLAP00000028156 | OTU deubiquitinase 3. | Small G protein signaling modulator 3. | 0.542 |
otud3 | ufsp2 | ENSPLAP00000005028 | ENSPLAP00000010791 | OTU deubiquitinase 3. | Ufm1-specific peptidase 2. | 0.489 |
pelo | sgsm3 | ENSPLAP00000016573 | ENSPLAP00000028156 | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | Small G protein signaling modulator 3. | 0.506 |
sgsm3 | ENSPLAP00000007554 | ENSPLAP00000028156 | ENSPLAP00000007554 | Small G protein signaling modulator 3. | Lipoyl-binding domain-containing protein. | 0.477 |
sgsm3 | LOC106947207 | ENSPLAP00000028156 | ENSPLAP00000023724 | Small G protein signaling modulator 3. | C2H2-type domain-containing protein. | 0.542 |
sgsm3 | PC | ENSPLAP00000028156 | ENSPLAP00000020191 | Small G protein signaling modulator 3. | Pyruvate carboxylase. | 0.477 |
sgsm3 | TBC1D13 | ENSPLAP00000028156 | ENSPLAP00000015911 | Small G protein signaling modulator 3. | TBC1 domain family member 13. | 0.426 |
sgsm3 | cog4 | ENSPLAP00000028156 | ENSPLAP00000013064 | Small G protein signaling modulator 3. | Component of oligomeric golgi complex 4. | 0.529 |
sgsm3 | nubpl | ENSPLAP00000028156 | ENSPLAP00000018630 | Small G protein signaling modulator 3. | Nucleotide binding protein-like. | 0.532 |
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