STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106962838Akirin 2. (179 aa)    
Predicted Functional Partners:
psma5
Proteasome subunit alpha type.
    
   0.878
psma1
Proteasome subunit alpha type.
    
   0.856
psma2
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
    
   0.848
psma4
Proteasome subunit alpha type.
    
   0.840
psmb2
Proteasome subunit beta.
    
   0.833
psmb3
Proteasome subunit beta.
    
   0.825
LOC106960711
Proteasome subunit alpha type.
    
   0.722
psma3
Proteasome subunit alpha type.
    
   0.684
psmb1
Proteasome subunit beta.
    
   0.684
LOC106941575
Proteasome subunit beta.
    
   0.684
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.