Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC106946631 | LOC106955007 | ENSPLAP00000001231 | ENSPLAP00000007465 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 6. | 0.896 |
LOC106946631 | LOC106962612 | ENSPLAP00000001231 | ENSPLAP00000006259 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 6. | 0.896 |
LOC106946631 | chmp2a | ENSPLAP00000001231 | ENSPLAP00000016587 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 2A. | 0.924 |
LOC106946631 | chmp4b | ENSPLAP00000001231 | ENSPLAP00000006847 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 4Bb. | 0.870 |
LOC106946631 | snf8 | ENSPLAP00000001231 | ENSPLAP00000030068 | Charged multivesicular body protein 6a. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.968 |
LOC106946631 | tm9sf1 | ENSPLAP00000001231 | ENSPLAP00000029898 | Charged multivesicular body protein 6a. | Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. | 0.847 |
LOC106946631 | vps25 | ENSPLAP00000001231 | ENSPLAP00000027853 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 25 homolog. | 0.975 |
LOC106946631 | vps28 | ENSPLAP00000001231 | ENSPLAP00000022235 | Charged multivesicular body protein 6a. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.899 |
LOC106946631 | vps36 | ENSPLAP00000001231 | ENSPLAP00000026566 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 36 homolog. | 0.954 |
LOC106955007 | LOC106946631 | ENSPLAP00000007465 | ENSPLAP00000001231 | Charged multivesicular body protein 6. | Charged multivesicular body protein 6a. | 0.896 |
LOC106955007 | chmp2a | ENSPLAP00000007465 | ENSPLAP00000016587 | Charged multivesicular body protein 6. | Charged multivesicular body protein 2A. | 0.923 |
LOC106955007 | chmp4b | ENSPLAP00000007465 | ENSPLAP00000006847 | Charged multivesicular body protein 6. | Charged multivesicular body protein 4Bb. | 0.870 |
LOC106955007 | snf8 | ENSPLAP00000007465 | ENSPLAP00000030068 | Charged multivesicular body protein 6. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.968 |
LOC106955007 | tm9sf1 | ENSPLAP00000007465 | ENSPLAP00000029898 | Charged multivesicular body protein 6. | Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. | 0.847 |
LOC106955007 | vps25 | ENSPLAP00000007465 | ENSPLAP00000027853 | Charged multivesicular body protein 6. | Vacuolar protein sorting 25 homolog. | 0.975 |
LOC106955007 | vps28 | ENSPLAP00000007465 | ENSPLAP00000022235 | Charged multivesicular body protein 6. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.899 |
LOC106955007 | vps36 | ENSPLAP00000007465 | ENSPLAP00000026566 | Charged multivesicular body protein 6. | Vacuolar protein sorting 36 homolog. | 0.954 |
LOC106960136 | chmp2a | ENSPLAP00000016693 | ENSPLAP00000016587 | Zgc:153240. | Charged multivesicular body protein 2A. | 0.912 |
LOC106960136 | chmp4b | ENSPLAP00000016693 | ENSPLAP00000006847 | Zgc:153240. | Charged multivesicular body protein 4Bb. | 0.847 |
LOC106960136 | snf8 | ENSPLAP00000016693 | ENSPLAP00000030068 | Zgc:153240. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.955 |
page 1 of 6