STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947703Forkhead box A3. (450 aa)    
Predicted Functional Partners:
LOC106964935
GATA binding protein 1a.
  
 0.786
gata6
GATA binding protein 6.
   
 0.782
hnf1a
HNF1 homeobox a.
   
 
 0.731
gata5
GATA binding protein 5.
   
 0.731
gata4
GATA binding protein 4.
   
 0.731
trps1
Trichorhinophalangeal syndrome I.
    
 0.718
LOC106958419
Uncharacterized protein.
    
 0.713
LOC106953245
GATA binding protein 2a.
    
 0.713
gata3
GATA binding protein 3.
    
 0.713
zglp1
GATA-type domain-containing protein.
    
 0.699
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.