STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106922384RAR-related orphan receptor C a. (474 aa)    
Predicted Functional Partners:
LOC106919386
Nuclear receptor corepressor 1.
    
 0.689
ncor2
Nuclear receptor corepressor 2.
    
 0.689
ENSPMEP00000030787
GPS2_interact domain-containing protein.
    
 0.689
nrip1
Nuclear receptor interacting protein 1b.
    
 0.672
rorb
RAR-related orphan receptor B.
  
  
 
0.658
LOC106919396
Sideroflexin 5a.
      
 0.602
uvrag
UV radiation resistance associated gene.
      
 0.602
LOC106927207
Link domain-containing protein.
      
 0.602
LOC106929223
Link domain-containing protein.
      
 0.602
LOC106926977
Selenoprotein J.
    
  0.570
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.