Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106922384RAR-related orphan receptor C a. (474 aa)    
Predicted Functional Partners:
LOC106919396
Sideroflexin 5a.
      
 0.708
nrip1
Nuclear receptor interacting protein 1b.
    
 0.705
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.661
LOC106916058
Aryl hydrocarbon receptor nuclear translocator-like 2.
    
 0.661
LOC106919386
Nuclear receptor corepressor 1.
    
  0.616
ncor2
Nuclear receptor corepressor 2.
    
  0.616
ENSPMEP00000030787
GPS2_interact domain-containing protein.
    
  0.616
csnk1d
Casein kinase 1, delta b; Belongs to the protein kinase superfamily.
    
 
 0.594
LOC106925814
Sidoreflexin.
      
 0.568
LOC106927207
Link domain-containing protein.
      
 0.566
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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