STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABHD1Abhydrolase domain containing 1. (424 aa)    
Predicted Functional Partners:
LOC106904233
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
  0.678
mgll
Monoglyceride lipase.
   
 0.652
lypla2
Lysophospholipase 2.
     
 0.635
lypla1
Lysophospholipase 1.
     
 0.635
pofut1
Protein O-fucosyltransferase 1.
      
 0.559
COL21A1
Collagen type XXI alpha 1 chain.
      
 0.559
epb41l2
FERM domain-containing protein.
      
 0.559
akap7
Uncharacterized protein.
      
 0.559
zbtb24
Zinc finger and BTB domain containing 24.
      
 0.559
b4galt5
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
      
 0.559
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.