Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NELL1Neural EGFL like 1. (484 aa)    
Predicted Functional Partners:
LOC106930803
Uncharacterized protein.
 
      0.897
nell2
Neural EGFL like 2a.
 
      0.892
cunh4orf48
Si:dkeyp-75h12.5.
   
 
 0.764
robo3
Roundabout, axon guidance receptor, homolog 3 (Drosophila).
    
 0.706
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.571
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.540
dbr1
Debranching RNA lariats 1.
    
 
 0.528
LOC106932470
DBR1 domain-containing protein.
    
 
 0.528
s100z
Protein S100; Belongs to the S-100 family.
   
 0.518
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.509
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: medium (44%) [HD]