STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106933042Cell division cycle 42. (191 aa)    
Predicted Functional Partners:
LOC106914450
Par-6 family cell polarity regulator gamma b.
    
 0.988
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.988
PAK3
Non-specific serine/threonine protein kinase.
   
 0.983
pak1
Non-specific serine/threonine protein kinase.
   
 0.979
iqgap2
IQ motif containing GTPase activating protein 2.
   
 0.979
LOC106905206
Uncharacterized protein.
    
 0.975
arhgap1
Uncharacterized protein.
    
 0.971
LOC106906927
WASP actin nucleation promoting factor a.
   
 0.971
wasl
WASP like actin nucleation promoting factor b.
   
 0.971
LOC106908381
WASP like actin nucleation promoting factor a.
   
 0.970
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.