STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001068RNA binding motif protein 15. (827 aa)    
Predicted Functional Partners:
wtap
WT1 associated protein.
    
 
 0.753
zc3h13
Zinc finger CCCH-type containing 13.
   
 
 0.726
virma
Vir like m6A methyltransferase associated.
    
 
 0.646
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
 
 0.646
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.634
nxf1
Zgc:153681.
    
 
 0.544
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.504
LOC106916248
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 
 0.504
thoc2
THO complex 2.
   
 
 0.501
cbll1
Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase.
      
 0.489
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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