Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001068RNA binding motif protein 15. (827 aa)    
Predicted Functional Partners:
wtap
WT1 associated protein.
    
 
 0.953
zc3h13
Zinc finger CCCH-type containing 13.
   
 
 0.944
virma
Vir like m6A methyltransferase associated.
   
 
 0.931
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
 
 0.920
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.864
alyref
Aly/REF export factor.
    
 
 0.859
LOC106921808
RRM domain-containing protein.
    
 
 0.740
trim23
Tripartite motif containing 23.
    
  0.696
thoc2
THO complex 2.
   
 
 0.679
alkbh5
AlkB homolog 5, RNA demethylase.
      
 0.674
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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