STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neurl4Neuralized E3 ubiquitin protein ligase 4. (1603 aa)    
Predicted Functional Partners:
mapk6
Mitogen-activated protein kinase 6.
    
 
 0.771
cep120
Centrosomal protein 120.
    
 0.634
ktn1
Kinectin 1.
    
 0.630
ccdc22
Coiled-coil domain containing 22.
     
 0.610
ENSPMEP00000033955
Uncharacterized protein.
    
 
 0.595
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
    
 
 0.591
LOC106918831
Ubiquitin-like domain-containing protein.
    
  0.589
LOC106903829
NEDD8 ubiquitin like modifier.
    
  0.589
cand1
Cullin-associated and neddylation-dissociated 1.
     
 0.588
LOC106923340
TIP120 domain-containing protein.
     
 0.588
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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