STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001130Uncharacterized protein. (279 aa)    
Predicted Functional Partners:
LOC106904865
G protein-coupled receptor kinase interacting ArfGAP 2b.
    
 0.727
git1
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.727
git2
G protein-coupled receptor kinase interacting ArfGAP 2a.
    
 0.727
ret
Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.
    
 0.680
ILK
Integrin linked kinase.
   
 0.670
ilk
Uncharacterized protein.
   
 0.670
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.639
LOC106911536
Uncharacterized protein.
    
 0.639
crk
CRK proto-oncogene, adaptor protein.
    
 0.639
ENSPMEP00000021646
PDZ domain-containing protein.
 
      0.636
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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