Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001130Uncharacterized protein. (279 aa)    
Predicted Functional Partners:
ENSPMEP00000021646
PDZ domain-containing protein.
 
   
  0.825
ret
Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.
    
 0.736
LOC106904376
LIM domain binding 3b.
 
 
  0.672
ENSPMEP00000010937
Actinin alpha 3b.
   
 
 0.668
ACTN4
Actinin alpha 4.
   
 
 0.668
actn1
Actinin, alpha 1.
   
 
 0.668
LOC106906181
Actinin, alpha 2b.
   
 
 0.668
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.601
LOC106911536
Uncharacterized protein.
    
 0.601
crk
CRK proto-oncogene, adaptor protein.
    
 0.601
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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