STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106928182Chromobox homolog 8b. (374 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
    
 0.934
rnf2
Ring finger protein 2.
    
 0.934
pcgf2
Polycomb group ring finger 2.
    
 0.931
ENSPMEP00000024337
Bmi1 polycomb ring finger oncogene 1a.
    
 0.931
cbx4
Chromobox 4.
    
0.896
LOC106904416
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
0.896
SCMH1
Scm polycomb group protein homolog 1.
    
 0.818
SCML2
Scm polycomb group protein like 2.
    
 0.818
LOC106914642
Scm polycomb group protein like 2.
    
 0.818
eed
Embryonic ectoderm development.
    
 0.815
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.