STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYRM2LYR motif containing 2; Belongs to the complex I LYR family. (123 aa)    
Predicted Functional Partners:
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.765
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 
 0.712
palb2
PALB2_WD40 domain-containing protein.
    
 
 0.626
lyrm1
LYR motif containing 1; Belongs to the complex I LYR family.
      
 0.552
ENSPMEP00000029814
LYR motif containing 9; Belongs to the complex I LYR family.
      
 0.543
lyrm4
Si:ch211-152c8.4; Belongs to the complex I LYR family.
      
 0.516
apbb3
Amyloid beta (A4) precursor protein-binding, family B, member 3.
      
 0.515
sdhaf3
Succinate dehydrogenase complex assembly factor 3.
      
 0.511
wdr55
WD repeat-containing protein 55; Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis. Belongs to the WD repeat WDR55 family.
      
 0.507
LOC106906789
LYR motif containing 5b; Belongs to the complex I LYR family.
   
  
 0.461
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.