lamtor5 protein (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

lamtor5

Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5. (91 aa)

Predicted Functional Partners:

lamtor3

0.999

lamtor1

0.999

lamtor2

0.999

slc38a9

0.999

lamtor4

0.999

LOC106923640

0.998

LOC106908914

0.996

rragc

0.996

ENSPMEP00000000772

0.967

rptor

0.967

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000000772	LOC106908914	ENSPMEP00000000772	ENSPMEP00000002299	Raptor_N domain-containing protein.	Uncharacterized protein.	0.950
ENSPMEP00000000772	LOC106923640	ENSPMEP00000000772	ENSPMEP00000025215	Raptor_N domain-containing protein.	Ras-related GTP binding A.	0.977
ENSPMEP00000000772	lamtor1	ENSPMEP00000000772	ENSPMEP00000018753	Raptor_N domain-containing protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	0.973
ENSPMEP00000000772	lamtor2	ENSPMEP00000000772	ENSPMEP00000021287	Raptor_N domain-containing protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.935
ENSPMEP00000000772	lamtor3	ENSPMEP00000000772	ENSPMEP00000013494	Raptor_N domain-containing protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.	0.965
ENSPMEP00000000772	lamtor4	ENSPMEP00000000772	ENSPMEP00000026138	Raptor_N domain-containing protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.	0.924
ENSPMEP00000000772	lamtor5	ENSPMEP00000000772	ENSPMEP00000001192	Raptor_N domain-containing protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	0.967
ENSPMEP00000000772	rptor	ENSPMEP00000000772	ENSPMEP00000020380	Raptor_N domain-containing protein.	Regulatory associated protein of MTOR, complex 1.	0.564
ENSPMEP00000000772	rragc	ENSPMEP00000000772	ENSPMEP00000032793	Raptor_N domain-containing protein.	Ras-related GTP binding Ca.	0.950
ENSPMEP00000000772	slc38a9	ENSPMEP00000000772	ENSPMEP00000022044	Raptor_N domain-containing protein.	Solute carrier family 38 member 9.	0.792
LOC106908914	ENSPMEP00000000772	ENSPMEP00000002299	ENSPMEP00000000772	Uncharacterized protein.	Raptor_N domain-containing protein.	0.950
LOC106908914	LOC106923640	ENSPMEP00000002299	ENSPMEP00000025215	Uncharacterized protein.	Ras-related GTP binding A.	0.997
LOC106908914	lamtor1	ENSPMEP00000002299	ENSPMEP00000018753	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	0.996
LOC106908914	lamtor2	ENSPMEP00000002299	ENSPMEP00000021287	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.996
LOC106908914	lamtor3	ENSPMEP00000002299	ENSPMEP00000013494	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.	0.995
LOC106908914	lamtor4	ENSPMEP00000002299	ENSPMEP00000026138	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.	0.990
LOC106908914	lamtor5	ENSPMEP00000002299	ENSPMEP00000001192	Uncharacterized protein.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.	0.996
LOC106908914	rptor	ENSPMEP00000002299	ENSPMEP00000020380	Uncharacterized protein.	Regulatory associated protein of MTOR, complex 1.	0.994
LOC106908914	rragc	ENSPMEP00000002299	ENSPMEP00000032793	Uncharacterized protein.	Ras-related GTP binding Ca.	0.901
LOC106908914	slc38a9	ENSPMEP00000002299	ENSPMEP00000022044	Uncharacterized protein.	Solute carrier family 38 member 9.	0.953