Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pelp1Proline, glutamate and leucine rich protein 1. (1266 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.651
tex10
Testis expressed 10.
    
 0.641
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
  0.439
ENSPMEP00000014077
Uncharacterized protein.
    
 0.421
suox
Sulfite oxidase.
    
   0.415
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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