STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106928172Perforin 1. (568 aa)    
Predicted Functional Partners:
LOC106916948
Perforin 1.5.
     
 
0.779
ENSPMEP00000014077
Uncharacterized protein.
    
  0.504
LOC106926641
Complement C1q C chain.
   
  0.496
LOC106906045
Uncharacterized protein.
    
  0.432
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
    
  0.432
rps27a
Ribosomal protein S27a.
    
  0.426
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
  0.422
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
  0.422
wdr18
WD repeat domain 18.
    
  0.415
ENSPMEP00000033048
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
  0.413
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.