STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
casp8ap2Uncharacterized protein. (1829 aa)    
Predicted Functional Partners:
sumo1
Small ubiquitin-related modifier.
    
  0.661
ENSPMEP00000028131
LisH domain-containing protein.
   
 
 0.658
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.644
LOC106906894
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.644
pias4
Protein inhibitor of activated STAT, 4a.
    
  0.621
kctd2
Potassium channel tetramerization domain containing 2.
    
 0.599
LOC106926427
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 
 0.563
LOC106924075
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 
 0.563
LOC106924079
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 
 0.524
wdr76
WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family.
      
 0.504
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.