STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001252Solute carrier family 30 member 6. (478 aa)    
Predicted Functional Partners:
slc30a5
Solute carrier family 30 member 5.
   
 
0.864
SLC39A12
Solute carrier family 39 member 12.
  
 0.690
hrct1
Solute carrier family 39 member 6.
  
 0.690
slc39a13
Solute carrier family 39 member 13.
   
 0.689
slc39a14
Solute carrier family 39 member 14.
  
 0.687
LOC106916857
ZIP4_domain domain-containing protein.
  
 0.678
LOC106919494
Solute carrier family 39 member 7.
  
 0.672
SLC39A11
Solute carrier family 39 member 11.
   
 0.654
LOC106917238
Solute carrier family 30 member 2.
   
 
 0.651
slc39a8
Solute carrier family 39 member 8.
  
 0.646
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.