STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001263Fork-head domain-containing protein. (318 aa)    
Predicted Functional Partners:
LOC106915108
Fork-head domain-containing protein.
  
  
 
0.894
LOC106907274
Forkhead box G1a.
  
  
 
0.892
LOC106929806
Zgc:153115.
    
 0.693
LOC106909763
Methyl CpG binding protein 2.
    
 0.678
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.675
sirt1
Sirtuin 1.
    
 0.661
suox
Sulfite oxidase.
     
 0.657
LOC106909302
Mothers against decapentaplegic homolog.
    
 0.654
SMAD4
Mothers against decapentaplegic homolog.
    
 0.654
LOC106923514
Mothers against decapentaplegic homolog.
    
 0.654
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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