Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001282Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
egr3
Early growth response 3.
  
 
 
0.908
egr2
Early growth response 2b.
  
 
 
0.908
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.570
ENSPMEP00000015565
NDK domain-containing protein.
    
 0.557
FOXJ3
Forkhead box J3.
    
 0.552
ehf
Ets homologous factor.
    
 
 0.530
tfap2e
Transcription factor AP-2 epsilon.
    
 
 0.516
irf8
Interferon regulatory factor 8.
    
 0.470
e2f3
E2F transcription factor 3.
    
 
 0.458
spi1
Spi-1 proto-oncogene b.
    
 
 0.446
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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