STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001299Ig-like domain-containing protein. (230 aa)    
Predicted Functional Partners:
ENSPMEP00000034415
Ig-like domain-containing protein.
    
  0.828
LOC106932167
Uncharacterized protein.
    
  0.781
ENSPMEP00000024430
Uncharacterized protein.
    
  0.781
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.755
fancm
Uncharacterized protein.
    
 0.746
pold1
DNA polymerase.
   
 0.707
LOC106918726
Survival of motor neuron 1, telomeric.
    
 0.688
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.651
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.648
ddx20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
   
 0.643
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.