STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106905429Ring finger protein 126. (312 aa)    
Predicted Functional Partners:
bag6
BCL2 associated athanogene 6.
    
 
 0.926
rspo2
R-spondin 2.
    
 0.837
rps27a
Ribosomal protein S27a.
    
 0.793
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.765
ENSPMEP00000030828
Ubiquitin-like domain-containing protein.
    
 0.765
get4
Guided entry of tail-anchored proteins factor 4.
   
 
 0.762
LOC106923389
Ubiquitin-like domain-containing protein.
    
  0.720
LOC106910773
R-spondin 4.
    
 0.694
RSPO3-2
Uncharacterized protein.
    
  0.673
LOC106909988
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 0.656
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.