LOC106905429 protein (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106905429	LOC106914991	ENSPMEP00000001316	ENSPMEP00000007603	Ring finger protein 126.	Ubiquitin like 4A.	0.751
LOC106905429	LOC106923389	ENSPMEP00000001316	ENSPMEP00000014676	Ring finger protein 126.	Ubiquitin-like domain-containing protein.	0.759
LOC106905429	bag6	ENSPMEP00000001316	ENSPMEP00000005488	Ring finger protein 126.	BCL2 associated athanogene 6.	0.930
LOC106905429	faf2	ENSPMEP00000001316	ENSPMEP00000002379	Ring finger protein 126.	Fas associated factor family member 2.	0.723
LOC106905429	get3	ENSPMEP00000001316	ENSPMEP00000023052	Ring finger protein 126.	ATPase ASNA1; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. [...]	0.912
LOC106905429	get4	ENSPMEP00000001316	ENSPMEP00000002657	Ring finger protein 126.	Guided entry of tail-anchored proteins factor 4.	0.940
LOC106905429	immt	ENSPMEP00000001316	ENSPMEP00000017936	Ring finger protein 126.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.709
LOC106905429	otub1	ENSPMEP00000001316	ENSPMEP00000022805	Ring finger protein 126.	Ubiquitin thioesterase.	0.697
LOC106905429	uba52	ENSPMEP00000001316	ENSPMEP00000013815	Ring finger protein 126.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.680
LOC106905429	ubxn7	ENSPMEP00000001316	ENSPMEP00000009780	Ring finger protein 126.	UBX domain protein 7.	0.737
LOC106914991	LOC106905429	ENSPMEP00000007603	ENSPMEP00000001316	Ubiquitin like 4A.	Ring finger protein 126.	0.751
LOC106914991	bag6	ENSPMEP00000007603	ENSPMEP00000005488	Ubiquitin like 4A.	BCL2 associated athanogene 6.	0.995
LOC106914991	faf2	ENSPMEP00000007603	ENSPMEP00000002379	Ubiquitin like 4A.	Fas associated factor family member 2.	0.929
LOC106914991	get3	ENSPMEP00000007603	ENSPMEP00000023052	Ubiquitin like 4A.	ATPase ASNA1; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. [...]	0.977
LOC106914991	get4	ENSPMEP00000007603	ENSPMEP00000002657	Ubiquitin like 4A.	Guided entry of tail-anchored proteins factor 4.	0.994
LOC106914991	uba52	ENSPMEP00000007603	ENSPMEP00000013815	Ubiquitin like 4A.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.847
LOC106914991	ubxn7	ENSPMEP00000007603	ENSPMEP00000009780	Ubiquitin like 4A.	UBX domain protein 7.	0.936
LOC106923389	LOC106905429	ENSPMEP00000014676	ENSPMEP00000001316	Ubiquitin-like domain-containing protein.	Ring finger protein 126.	0.759
LOC106923389	bag6	ENSPMEP00000014676	ENSPMEP00000005488	Ubiquitin-like domain-containing protein.	BCL2 associated athanogene 6.	0.727
LOC106923389	faf2	ENSPMEP00000014676	ENSPMEP00000002379	Ubiquitin-like domain-containing protein.	Fas associated factor family member 2.	0.643