Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnal4Dynein light chain. (106 aa)    
Predicted Functional Partners:
bmf
Uncharacterized protein.
    
 0.921
TCTEX1D1
Tctex1 domain containing 1.
    
 0.916
DYNLRB2
Dynein light chain roadblock.
   
 0.885
LOC106909204
Dynein light chain roadblock.
   
 0.885
LOC106909198
Dynein light chain roadblock.
   
 0.885
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.878
dynlt1
Dynein, light chain, Tctex-type 1.
   
 
 0.854
wdr90
WD repeat domain 90.
   
 0.848
exd1
3'-5' exonuclease domain-containing protein.
    
 
 0.847
ENSPMEP00000015565
NDK domain-containing protein.
   
 
 0.846
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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