Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
gal3st4Galactose-3-O-sulfotransferase 4. (514 aa)    
Predicted Functional Partners:
arsa
Arylsulfatase A.
      
 0.727
LOC106922540
SH3 domain-containing protein.
      
 0.694
gcnt4
Si:dkeyp-87d8.8.
      
 0.693
inpp5d
Inositol polyphosphate-5-phosphatase D.
      
 0.681
ATE1
Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.676
LOC106931427
Sialidase 4.
      
 0.664
TINAGL1
Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family.
      
 0.658
dtymk
Deoxythymidylate kinase (thymidylate kinase).
      
 0.602
sbno2
Strawberry notch homolog 2.
      
 0.497
sbno1
Strawberry notch homolog 1 (Drosophila).
      
 0.497
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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