STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106928171ANK_REP_REGION domain-containing protein. (1043 aa)    
Predicted Functional Partners:
LOC106927057
Serine/threonine-protein phosphatase.
   
 0.759
PPP6C
Serine/threonine-protein phosphatase.
   
 0.759
ppp6r3
Protein phosphatase 6, regulatory subunit 3.
    
 0.731
ppp6r2
Protein phosphatase 6, regulatory subunit 2a.
    
 0.731
LOC106924870
Protein phosphatase 6, regulatory subunit 2b.
    
 0.731
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.633
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.608
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.606
acp5
Tartrate-resistant acid phosphatase type 5.
   
 0.602
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.601
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.