STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106921008Troponin I type 1b (skeletal, slow). (216 aa)    
Predicted Functional Partners:
LOC106905121
Si:rp71-17i16.4.
   
 0.935
ENSPMEP00000033374
Troponin T2d, cardiac.
  
 0.935
LOC106929192
Uncharacterized protein.
  
 0.933
tnnt2
Troponin T type 2a (cardiac).
  
 0.932
ENSPMEP00000023483
Uncharacterized protein.
  
 0.931
ENSPMEP00000001358
Troponin T type 2b (cardiac).
  
 0.930
ENSPMEP00000001990
Uncharacterized protein.
  
 0.928
ENSPMEP00000018605
annotation not available
  
 0.928
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.927
LOC106906803
Uncharacterized protein.
   
 0.927
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.