Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106929665Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (260 aa)    
Predicted Functional Partners:
LOC106924075
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.918
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 0.915
LOC106906082
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
    
 0.915
LOC106931868
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.914
casp7
Caspase 7, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.914
LOC106926427
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
  0.911
LOC106924079
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.908
LOC106920368
MCL1 apoptosis regulator, BCL2 family member b.
     
  0.900
dffa
DNA fragmentation factor, alpha polypeptide.
    
  0.900
LOC106913013
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.701
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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