Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nectin1Nectin cell adhesion molecule 1b. (508 aa)    
Predicted Functional Partners:
ENSPMEP00000015878
Uncharacterized protein.
    
0.997
LOC106919075
Nectin cell adhesion molecule 3b.
    
0.997
afdn
Afadin, adherens junction formation factor a.
    
 0.997
LOC106933623
Uncharacterized protein.
    
0.991
LOC106917864
Si:ch73-22o12.1.
   
 
0.938
ENSPMEP00000011588
Uncharacterized protein.
    
 0.922
PARD3
Par-3 family cell polarity regulator.
    
 0.922
LOC106931209
Ig-like domain-containing protein.
     
 
0.914
ENSPMEP00000000773
Ig-like domain-containing protein.
     
  0.900
LOC106921305
Nectin cell adhesion molecule 1a.
     
 
0.900
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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