Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106921261Uncharacterized protein. (963 aa)    
Predicted Functional Partners:
arhgap10
Rho GTPase activating protein 10.
    
   0.743
c2cd2
C2 calcium dependent domain containing 2.
    
   0.689
LOC106933042
Cell division cycle 42.
    
 0.617
CDC42
Cell division cycle 42.
    
 0.617
LOC106931696
Uncharacterized protein.
    
 0.577
LOC106903887
Uncharacterized protein.
    
 0.577
LOC106918068
Uncharacterized protein.
    
 0.577
LOC106925151
Uncharacterized protein.
    
 0.577
LOC106926573
Uncharacterized protein.
    
 0.577
LOC106931768
Ras homolog family member Ca.
    
 0.577
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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