Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctszCathepsin Z; Belongs to the peptidase C1 family. (303 aa)    
Predicted Functional Partners:
bcl2
BCL2 apoptosis regulator b.
     
 0.906
LOC106924557
Cathepsin D; Belongs to the peptidase A1 family.
   
 0.862
lgmn
Legumain.
   
 
 0.768
LOC106908427
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.747
LOC106925830
Baculoviral IAP repeat containing 5a.
     
 0.728
LOC106930007
Deoxyribonuclease II beta.
   
 
 0.706
LOC106908294
Deoxyribonuclease II, lysosomal.
   
 
 0.706
LOC106933640
BH4_2 domain-containing protein.
     
 0.695
BCL2L1
BCL2 like 1.
     
 0.695
LOC106918389
Si:ch211-212k18.7.
   
 
 0.677
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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