STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106904585Uncharacterized protein. (471 aa)    
Predicted Functional Partners:
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.755
fancm
Uncharacterized protein.
    
 0.746
LOC106916113
Uncharacterized protein.
   
 0.711
pold1
DNA polymerase.
   
 0.707
LOC106930126
Uncharacterized protein.
     
 0.691
LOC106918726
Survival of motor neuron 1, telomeric.
    
 0.688
LOC106925204
Uncharacterized protein.
     
 0.670
ENSPMEP00000034845
Uncharacterized protein.
    
 0.668
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.651
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.648
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.