STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001418Kazal-like domain-containing protein. (105 aa)    
Predicted Functional Partners:
LOC106908804
Peptidase S72 domain-containing protein.
   
 0.891
LOC106929752
Dystroglycan 1.
   
 0.891
lrp4
Low density lipoprotein receptor-related protein 4.
    
 0.724
LOC106932785
Low density lipoprotein receptor-related protein 2b.
    
 0.654
LOC106909346
Uncharacterized protein.
    
 0.654
LOC106930499
Very low-density lipoprotein receptor-like.
    
 0.654
lrp2
Low density lipoprotein receptor-related protein 2a.
    
 0.654
ENSPMEP00000031524
Si:dkey-88l16.3.
    
 0.654
LOC106909474
Low density lipoprotein receptor-related protein 5.
    
 0.591
lrp6
Low density lipoprotein receptor-related protein 6.
    
 0.591
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.