Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lmo4LIM domain only 4b. (177 aa)    
Predicted Functional Partners:
ENSPMEP00000009387
SAE2 domain-containing protein.
    
 
 0.859
idi1
Isopentenyl-diphosphate delta isomerase 1.
    
   0.815
LOC106904345
LIM domain binding 1a.
   
 0.808
LOC106933726
LIM domain binding 2a.
   
 0.808
LOC106917531
LIM-domain binding 1b.
   
 0.808
brca1
Uncharacterized protein.
    
 
 0.630
ENSPMEP00000015565
NDK domain-containing protein.
    
   0.617
ISL2
ISL LIM homeobox 2b.
    
   0.604
LOC106910099
ISL LIM homeobox 1.
    
   0.604
LOC106928280
ISL LIM homeobox 2a.
    
   0.604
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.