Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001436Kazal-like domain-containing protein. (88 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.890
LOC106908804
Peptidase S72 domain-containing protein.
   
 0.843
LOC106929752
Dystroglycan 1.
   
 0.843
nudcd1
NudC domain containing 1.
    
   0.688
lrp4
Low density lipoprotein receptor-related protein 4.
    
 0.676
LOC106932785
Low density lipoprotein receptor-related protein 2b.
    
 0.582
LOC106909346
Uncharacterized protein.
    
 0.582
LOC106930499
Very low-density lipoprotein receptor-like.
    
 0.582
lrp2
Low density lipoprotein receptor-related protein 2a.
    
 0.582
ENSPMEP00000031524
Si:dkey-88l16.3.
    
 0.582
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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