Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
birc2Baculoviral IAP repeat containing 2. (673 aa)    
Predicted Functional Partners:
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.994
casp9
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.993
LOC106905144
X-linked inhibitor of apoptosis.
   
0.992
casp7
Caspase 7, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.991
tradd
Tnfrsf1a-associated via death domain.
   
 0.990
ripk2
Receptor-interacting serine-threonine kinase 2.
   
 0.990
LOC106927688
Uncharacterized protein.
    
 0.986
LOC106905618
Diablo, IAP-binding mitochondrial protein a.
    
 0.986
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.985
RNF31
Ring finger protein 31.
    
 0.985
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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