STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpcn2Uncharacterized protein. (659 aa)    
Predicted Functional Partners:
ENSPMEP00000016872
Uncharacterized protein.
   
 0.998
tpcn1
Two pore segment channel 1.
    
0.935
LOC106912857
Uncharacterized protein.
     
 0.899
LOC106912836
Uncharacterized protein.
     
 0.899
LOC106912868
Uncharacterized protein.
     
 0.888
LOC106918976
Two pore segment channel 3.
    
0.800
IFT122
Intraflagellar transport 122.
   
 0.766
wdr19
WD repeat domain 19.
    
 0.758
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.755
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
    
 0.696
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.