STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001485Ribosomal protein S6 kinase related b. (342 aa)    
Predicted Functional Partners:
LOC106911720
3-phosphoinositide dependent protein kinase 1b.
    
0.705
PDPK1
3-phosphoinositide-dependent protein kinase 1-like.
    
0.705
LOC106925217
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
   
  0.611
ripk4
Receptor-interacting serine-threonine kinase 4.
   
  0.611
map2k1
Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
    
0.590
map2k2
Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.
    
0.590
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
    
0.590
sh3rf3
SH3 domain containing ring finger 3.
    
  0.547
LOC106933235
IGv domain-containing protein.
    
 0.544
LOC106926452
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.539
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.