Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001487Ankyrin 1, erythrocytic a. (533 aa)    
Predicted Functional Partners:
LOC106925021
Uncharacterized protein.
    
 0.586
LOC106920837
L1 cell adhesion molecule, paralog a.
    
 0.586
chl1
Cell adhesion molecule L1-like b.
    
 0.586
nfasc
Neurofascin homolog (chicken) a.
    
 0.586
LOC106920320
Uncharacterized protein.
    
 0.586
nrcam
Neuronal cell adhesion molecule a.
    
 0.586
NRCAM
Neuronal cell adhesion molecule.
    
 0.586
LOC106917704
Spectrin beta chain; Belongs to the spectrin family.
   
 0.578
ENSPMEP00000003677
Uncharacterized protein.
   
 0.568
ENSPMEP00000023321
Uncharacterized protein.
   
 0.568
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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