STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106924410Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
LOC106927065
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.695
LOC106907313
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.695
set
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.695
LOC106908118
Histone H2A; Belongs to the histone H2A family.
   
 
 0.684
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.684
xpo1
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.516
ENSPMEP00000003115
Uncharacterized protein.
   
 0.516
xpo5
Exportin 5.
   
 0.516
xpo6
Exportin 6.
   
 0.516
LOC106933631
Exportin 1 (CRM1 homolog, yeast) a.
   
 0.516
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.