STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rabifRAB interacting factor. (125 aa)    
Predicted Functional Partners:
LOC106924445
ZRAB1B, member RAS oncogene family a.
    
 
 0.671
rab1a
Uncharacterized protein.
    
 
 0.671
LOC106917326
Zgc:171927.
    
 
 0.671
LOC106911433
Uncharacterized protein.
    
 
 0.671
LOC106932982
RAB33A, member RAS oncogene family.
    
 
 0.663
LOC106927668
Zgc:101559.
    
 
 0.663
LOC106908710
Filamin A interacting protein 1b.
    
 
 0.663
LOC106931165
Uncharacterized protein.
    
 
 0.663
rabl6
RAB, member RAS oncogene family-like 6b.
    
 
 0.663
cgnl1
Cingulin-like 1.
    
 
 0.663
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.