Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106908984Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
LOC106916559
Interleukin 11a.
     
 0.952
LOC106930939
Uncharacterized protein.
    
 0.920
il6st
Uncharacterized protein.
    
0.920
LOC106922796
Uncharacterized protein.
   
 0.873
LOC106918996
Uncharacterized protein.
     
  0.800
LOC106917778
Uncharacterized protein.
    
 0.617
LOC106917777
Interleukin 12 receptor, beta 2a.
    
 0.617
agap3
ArfGAP with GTPase domain, ankyrin repeat and PH domain 3.
     
  0.514
agap2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
     
  0.514
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2.
     
  0.514
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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