Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPMEP00000001513Chemokine (C-C motif) receptor 9b; Belongs to the G-protein coupled receptor 1 family. (374 aa)    
Predicted Functional Partners:
LOC106914765
Chemokine (C-C motif) ligand 25a.
     
 0.931
LOC106930181
Chemokine (C-C motif) ligand 25b.
     
 0.931
LOC106903901
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.901
apln
Apelin.
    
 0.664
cd8a
Ig-like domain-containing protein.
   
  
 0.600
ENSPMEP00000008139
Neurotensin.
    
 0.590
LOC106931735
SCY domain-containing protein.
    
 0.564
rag2
Recombination activating gene 2.
      
 0.510
LOC106934273
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.498
LOC106934267
SCY domain-containing protein; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.498
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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