STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106908980Uncharacterized protein. (357 aa)    
Predicted Functional Partners:
bloc1s6
Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.
    
 0.848
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
     
 0.815
bloc1s3
Biogenesis of lysosome-related organelles complex 1 subunit 3; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO). Belongs to the BLOC1S3 family.
     
 0.798
snapin
SNAP associated protein.
     
 0.646
txndc5
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
  
  0.624
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
      
 0.533
hps6
Uncharacterized protein.
      
 0.450
LOC106914454
Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino.
     
 0.417
amh
Anti-Mullerian hormone.
   
  
 0.407
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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