STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106928169Innate immunity activator b. (613 aa)    
Predicted Functional Partners:
sav1
Salvador family WW domain containing protein 1.
    
 0.648
frmd1
FERM domain-containing protein.
    
 0.638
frmd6
FERM domain containing 6.
    
 0.638
trip12
Thyroid hormone receptor interactor 12.
    
 0.549
LOC106903858
Uncharacterized protein.
    
 0.542
LOC106913124
Uncharacterized protein.
    
 0.542
LOC106905344
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.542
LOC106933018
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
  0.515
LOC106927638
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
  0.515
LOC106925006
Membrane associated guanylate kinase, WW and PDZ domain containing 1b.
    
  0.478
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (38%) [HD]