Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
golim4Uncharacterized protein. (758 aa)    
Predicted Functional Partners:
emc6
ER membrane protein complex subunit 6.
      
 0.842
aicda
Activation-induced cytidine deaminase.
      
 0.753
nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
      
 0.710
mmab
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.709
LOC106908759
Si:ch73-193i2.2; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.686
LOC106916565
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.686
LOC106907723
Nucleolar protein 9.
      
 0.677
LOC106907728
Nucleolar protein 9.
      
 0.677
tecpr2
Tectonin beta-propeller repeat containing 2.
      
 0.665
ephb6
Receptor protein-tyrosine kinase.
      
 0.658
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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