Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r1bProtein phosphatase 1, regulatory (inhibitor) subunit 1B. (237 aa)    
Predicted Functional Partners:
cdk5
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
    
 0.957
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.807
LOC106907457
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.807
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.776
LOC106924700
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.776
LOC106931920
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.776
LOC106932448
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.776
lasp1
LIM and SH3 protein 1.
      
 0.706
dock5
Dedicator of cytokinesis 5; Belongs to the DOCK family.
      
 0.697
fpgt
Fucose-1-phosphate guanylyltransferase.
      
 0.696
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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