Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106921122Transmembrane and immunoglobulin domain containing 1. (248 aa)    
Predicted Functional Partners:
LOC106930028
Uncharacterized protein.
   
  
 0.948
LOC106915172
Clarin 3.
   
  
 0.700
mrm3
Mitochondrial rRNA methyltransferase 3a.
      
 0.699
ENSPMEP00000012580
Solute carrier family 10 member 3.
   
  
 0.638
slc10a2
Solute carrier family 10 member 2.
   
  
 0.638
LOC106932462
Elastase 2; Belongs to the peptidase S1 family.
      
 0.632
ENSPMEP00000007393
Hydroxycarboxylic acid receptor 1-3; Belongs to the G-protein coupled receptor 1 family.
      
 0.617
mturn
Maturin, neural progenitor differentiation regulator homolog (Xenopus).
      
 0.615
ENSPMEP00000029790
Amnion associated transmembrane protein.
   
  
 0.592
LOC106932296
Si:dkey-28n18.9.
      
 0.568
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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